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This commit is contained in:
Shannon Sands 2025-05-27 12:15:15 +10:00
parent 13a70e09ab
commit 54967ecae9
19 changed files with 1337 additions and 531 deletions
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environments/community/protein_design/configs/binderbench_default.yaml Normal file
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# Debug Mode - set to true to use mock data instead of actual API calls
debug_protein_design_calls: false
max_retries_per_internal_step: 100
nim_api_base_url: "https://health.api.nvidia.com/v1"
api_timeout: 600
polling_interval: 10
output_dir: "environments/hack0/protein_design_env/outputs"
use_wandb: true
wandb_name: "binderbench"
wandb_project: "atropos"
include_messages: true
dataset_name: "ronig/protein_binding_sequences"
target_col: "receptor"
binder_col: "peptide"