# NVIDIA NIM Environment Default Configuration for BinderBench # Debug Mode - set to true to use mock data instead of actual API calls debug_protein_design_calls: false # Retry settings for failed steps max_retries_per_internal_step: 100 # Increased to allow many retries for tool calls # API Settings # nim_api_key is loaded from .env file using NVIDIA_NIM_API_KEY nim_api_base_url: "https://health.api.nvidia.com/v1" api_timeout: 600 polling_interval: 10 # Protein Design Settings output_dir: "environments/hack0/protein_design_env/outputs" # WandB tracking settings use_wandb: true wandb_name: "binderbench" wandb_project: "atropos" # Will default to this if not specified include_messages: true # Include messages in WandB logs # Dataset configuration dataset_name: "ronig/protein_binding_sequences" target_col: "receptor" binder_col: "peptide" # Scoring weights for final complex quality metric_weights: plddt: 0.3 ptm: 0.3 iptm: 0.4